| Date |
Event |
Time |
Title & Presenter |
Links |
| Wednesday July 11 |
OpenBio Codefest 2012 |
All Day |
Enis Afgan and Dannon Baker of the the Galaxy Team will participate. |
Report |
| Thursday July 12 |
| |
| Friday July 13 |
BOSC |
11:35-12:00 |
MGTAXA - a toolkit and a Web server for predicting taxonomy of the metagenomic sequences with Galaxy front-end and parallel computational back-end, Andrey Tovchigrechko, JCVI |
slides |
| |
|
| Saturday July 14 |
10:45-11:00 |
GenomeSpace: An open source environment for frictionless bioinformatics, Michael Reich, Broad Institute |
slides |
| 11:00-11:15 |
Galaxy Project Update, Dannon Baker, Emory University |
slides |
| 11:15-11:30 |
Zero to a Bioinformatics Analysis Platform in 4 Minutes, Enis Afgan, Ruđer Bošković Institute (RBI) and Victorian Life Science Computation Initiative (VLSCI) |
slides |
| 2:40-2:55 |
A Framework for Interactive Visual Analysis of NGS Data using Galaxy, Jeremy Goecks, Emory University |
slides |
| |
| Sunday July 15 |
ISMB 2012 |
12:15-12:40 |
TT06 - The Taverna Server: Executing Scientific Workflows Remotely, Katy Wolstencroft, University of Manchester |
|
| 2:30-2:55 |
TT08: Interactive Visual Analysis of NGS Data using Trackster and Galaxy, Jeremy Goecks, Emory University |
Slides |
| 3:00-3:25 |
TT10: The first biomedical AppStore: Galaxy Tool Shed, Greg von Kuster, Penn State University |
Slides |
| |
|
| Monday July 16 |
10:45-11:10 |
TT15 - GenomeSpace: An environment for frictionless bioinformatics, Michael Reich, Broad Institute |
|
| 11:45-12:10 |
WK3 - Part C: Running a Bioinformatics Help Desk: from drawing colorful plasmid maps to working with Hi Seq Data, Hans-Rudolf Hotz, Friedrich Miescher Institute |
Slides |
| 12:40-2:30 |
Poster A33: A large-scale microbial whole genome sequencing pipeline for outbreak investigation, Natalie Knox, Public Health Agency of Canada |
|
| Poster AA07: GenomeSpace: An environment for frictionless bioinformatics, Michael Reich, Broad Institute |
poster |
| Poster E09: LIMS and Bioinformatics Support for the GLBRC Seed-to-Biofuels Research Pipeline, Yury Bukhman, Great Lakes Bioenergy Research Center |
poster |
| Poster G19: RNA-Seq Analysis of Eucalyptus Genotypes that Differ in Carbon Allocation, Adhemar Zerlotini, EMBRAPA |
|
| Poster K01: BiocaNet: Central American Bioinformatics Network, Allan Orozco Central American Bioinformatics Institutional Network (BiocaNET) |
|
| Poster S07: BE Seeker 2: Enhanced algorithm for analysis of large scale BS and RRBS data, Petko Fiziev University of California, Los Angeles |
|
| Poster U17: Bioinformatics Tools and Analysis for RAD Tag Analysis of Incipient Speciation, Lauren Assour University of Notre Dame |
|
| |
|
| Tuesday July 17 |
12:40-2:30 |
Poster A50: Enabling the reuse of methods while unraveling the epigenetic factors of Huntington's Disease, Marco Roos, Netherlands Bioinformatics Centre |
|
| Poster E12: Managing complex bioinformatics pipelines through PyPedia and MOLGENIS, Marcel Kempenaar, University Medical Center Groningen |
|
| Poster U28: Data Intensive Academic Grid (DIAG): A Computational Cloud Infrastructure Designed for Bioinformatics Analysis, Anup Mahurkar Institute for Genome Sciences |
|
| Poster U36: Nebula - a web-server for advanced ChIP-Seq data analysis, Valentina Boeva, Institut Curie |
poster |
| Poster U52: Lessons learned from RNA-Seq Read Alignment Evaluations, Andre Kahles, Memorial Sloan-Kettering Cancer Center |
|
